- Institute of Computer Science, which includes:
- Division of Modelling and Design of Information Systems
- Division of Computer Systems and Computer Networks
- Division of Media and Information Technology
- Laboratory of Tyfloinformatics
- Computer Network Management Center of the Institute of Computer Science
- Institute of Mathematics and Physics, which includes:
- Division of Mathematical Analysis
- Division of Physics and Numerical Analysis
- Division of Applied Mathematics
- Division of Algebra and Number Theory
- Laboratory of Didactics of Mathematics
- Cultural Mathematics Center
